CDS

Accession Number TCMCG057C44901
gbkey CDS
Protein Id XP_018451220.1
Location join(10582861..10582916,10583023..10583122,10583199..10583267,10583372..10583608,10583679..10583856,10583939..10584071,10584151..10584313,10584407..10584557,10584654..10584910,10585009..10585077,10585161..10585229,10585312..10585449,10585541..10585669,10585767..10585914,10586006..10586016,10586120..10586260,10586362..10586490,10586566..10586631,10586733..10587069,10587162..10587403,10587483..10587596)
Gene LOC108822600
GeneID 108822600
Organism Raphanus sativus

Protein

Length 978aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018595718.1
Definition PREDICTED: villin-4-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description at4g30160 (e 0.0) vln4, atvln4 vln4 (arabidopsis thaliana villin 4)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05768        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008154        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030042        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0030835        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043624        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051014        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051261        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051592        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051693        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0099636        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGTTTCAATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAAAAAGCCGGTATTGAGGTATGGCGTATAGAGAATTTCAGCCCTGCACCCATTCCTAAGTCTTCCATTGGGAAGTTTTTCACCGGAGATTCTTACATAGTACTGAAGACAACGGCGCTAAAAACAGGTGCTTTGCGTCATGATATCCATTACTGGCTTGGTAAAGATACCTCTCAGGATGAAGCTGGGACGGCTGCAGTTAAAACGGTTGAACTAGATGCAGCTCTAGGAGGCCGTGCAGTTCAGTACCGGGAAGTTCAAGGCCACGAAACCGAGAAGTTCTTGTCATATTTTAAGCCATGTATCATACCTCAAGAAGGTGGAGTAGCTTCAGGATTCAAACATGTGGAAGCTGAAGAACATATCACCCGTTTGTTCGTCTGCAGAGGAAAGCATGTTGTTCATGTCAAAGAGGTTCCGTTTGCTCGGAGTTCTTTGAACCATGACGATATATACATTCTTGACACAAAGTCCAAGATTTTCCAGTTCAATGGATCAAATTCAAGTATCCAAGAGAGAGCAAAAGCATTGGAAGTGGTTCAGTACATCAAAGATACTTACCATGATGGCACATGTGAAGTTGCTACAGTTGAGGATGGGAGACTTATGGCTGATGCTGAGAGTGGAGAGTTTTGGGGCTTCTTTGGTGGTTTCGCTCCGCTACCTAGAAAAACAGCTAGTGATGAAGACAAAACTTACAACTCCGATATCACAAAATTGTTTTGTGTGGAGAAGGGACAAGCAAATCCTGTTGAAGGAGATTCTTTGAAAAGAGAGATGCTGGATACAAGCAAGTGTTACATTCTTGATTGTGGACTCGAAGTGTTTGTTTGGATGGGTAGAACCACATCTCTTGATGATAGAAAAGTAGCGAGTGGAGCAGCAGAAGAAATGATTCGTTCATCTGAACGACCCAAATCGCAAATGATCCGCATAATAGAAGGGTTTGAAACCGTGACGTTCAGATCAAAGTTTGATACCTGGACTCAAGAAACTAATAATACAACCGTGTCAGAGGACGGTAGAGGCAGAGTTGCTGCACTTTTGCAACGACAAGGAGTGAATGTGAGAGGCCTAATGAAAGCTGCTCCACCTAAAGAAGAGCCACAAGCTTTCATTGATTGCACGGGGAATCTGCAGGTTTGGCGTGTGAATGGTCAGGAAAAGATACTCCTTCAAGCTTCTGATCATTCGAAGTTCTACAGTGGAGATTGCTATGTTTTCCAGTATTCCTATCCCGGAGAAGAAAAAGAAGAAGTTCTTATAGGAACTTGGTTCGGCAAGCAAAGTGTGGAGGAAGAAAGAGCTTCTGCAGTCTCTATGGCTAGCAAAATGGTTGAGTCAATGAAGTTTGTGCCAGCCCAAGCTCGCATCTATGAAGGAAAAGAACCTCTTCAGTTCTTTGTGATTATGCAAAGCTTTATAGTTTTCAAGGGTGGTATTAGCAATGGATACAAGAAATACATAGCAGAGAAAGAAGTGGATGATGATACATACAATGAGAATGGTCTTGCTCTATTCCGCATTCAAGGGTCTGGTCCTGAGAATATGCAAGCTATACAAGTTGACCCGGTTGCTTCATCGCTGAACTCCTCATACTGTTACATACTACATAATGGTTCTTCTGTCTTTACTTGGATCGGGAATCTAGCAACCTCAACTGACCAGGAACTCGTTGAGAGACAGCTCGATCTTATCAAGCCAAACCTACAGACTAGAGCACAAAAGGAAGGTTCAGAGTCTGAACAGTTCTGGGAGTTATTAGGAGGCAAAACCGAATATCGGAGCCAGAAGCTCACAAAAGAACCAGAGAGTGACCCTCACTTGTTCTCCTGCTCTTTCTCTAAAGACATTCTGAAGGTGACAGAGATATATAACTTCACTCAAGATGACTTGATGACAGAAGATATATTTATTGTTGACTGTCACTCAGAGATCTTTGTGTGGGTTGGCCAAGAAGTAGCCCCCAAGAATAAGTTGCAAGCTTTAACTATTGGAGAGAAATTCATAGAGAAAGATTCTCTCCTGGAAAAGTTATCCCCTGAAGCTCCTATCTATGTGATCATGGAAGGTGGTGAGCCAAGTTTCTTCACCCGGTTTTTCACTTCTTGGGATTCCTCTAAATCAGCTATGCATGGAAACTCATTCCAAAGAAAACTTAGAATTGTGAAAAATGGTGGAACTCCAGTTGCAGAAAAACCGAAGCGAAGAACTCCAGCTTCATATAGTGGACGAGCCAGCGTTCCTGACAAGTCACAGCAGCGGACGAGAAGCATGTCGTTTAGTCCAGAGAGGGTTCGTGTGAGGGGAAGATCTCCAGCGTTCAATGCACTGGCAGCAACATTCGAGAGTCAAAATGCAAGAAACCTCTCAACTCCTCCACCAGTAGTTAGAAAACTCTACCCGAGATCTGTCACTCCTGATTCATCAAAGCTTGCTCCCAAGTCTTCAGCCATTTCTTCTCGTAGTGCCCTTTTCGAACAACGGTTAAAGACACCTCCCCGAGAACCTTCCGTTTCAAAACCTCCCAAAGCGAGCCCGAAGACACCTGAGTCTCCAGCTCCAGAATCCAGCTCAAAAGGAAAGGAAGAGAAGAAGGAAAATGACAAGGAGGAGGAGGAGAAATCAATGAGCAGCAGGATAGAATCTCTGACGATTCAAGAAGATGCTAAAGAAGGTGTGGAAGAGGAAGAAGACTTACCAGCTCACCCATACGAACGTCTCAAGACAACTTCATCTGATCCTGTCTCAGACATTGATGTAACAAGGAGAGAGGCTTACCTGTCATCAGAAGAGTTCAAAGAGAAGTTTGGTATGACTAAAGAAGCTTTCTACAAGCTGCCTAAATGGAAACAAAACAAATTCAAGATGGCTGTTCAACTCTTCTGA
Protein:  
MSVSMRDLDPAFQGAGQKAGIEVWRIENFSPAPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHITRLFVCRGKHVVHVKEVPFARSSLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGRLMADAESGEFWGFFGGFAPLPRKTASDEDKTYNSDITKLFCVEKGQANPVEGDSLKREMLDTSKCYILDCGLEVFVWMGRTTSLDDRKVASGAAEEMIRSSERPKSQMIRIIEGFETVTFRSKFDTWTQETNNTTVSEDGRGRVAALLQRQGVNVRGLMKAAPPKEEPQAFIDCTGNLQVWRVNGQEKILLQASDHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERASAVSMASKMVESMKFVPAQARIYEGKEPLQFFVIMQSFIVFKGGISNGYKKYIAEKEVDDDTYNENGLALFRIQGSGPENMQAIQVDPVASSLNSSYCYILHNGSSVFTWIGNLATSTDQELVERQLDLIKPNLQTRAQKEGSESEQFWELLGGKTEYRSQKLTKEPESDPHLFSCSFSKDILKVTEIYNFTQDDLMTEDIFIVDCHSEIFVWVGQEVAPKNKLQALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLRIVKNGGTPVAEKPKRRTPASYSGRASVPDKSQQRTRSMSFSPERVRVRGRSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKLAPKSSAISSRSALFEQRLKTPPREPSVSKPPKASPKTPESPAPESSSKGKEEKKENDKEEEEKSMSSRIESLTIQEDAKEGVEEEEDLPAHPYERLKTTSSDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF